Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015950111.1_cds_XP_016490717.1_81115
CDS Infomation

[gene=LOC107810447] [db_xref=GeneID:107810447] [protein=protein FAF-like, chloroplastic] [protein_id=XP_016490717.1] [location=52898..54415] [gbkey=CDS]
Sequence

ATGTCAGCAGCAACAATGAGCATCAAGAACTTCAACTCAACTTTGAAGATGGAAGATAAG
GGTATACCACTACCCCCACCACTACCCCCATTATCTAAGGCAGGCAAAGCAAAACAACAA
GGCATAATGTCCATTCTTGGATCAGACAACAACAAAGCAGCTGCAGTAGTTTCCATTAGA
AGAACTCTTTCAGCTGATATGTCATCCAAAAAATGGCTTTCACAAAATGGATTCTTCTCC
CCTATGAAGAAAATTGCCTCCTCGGAAGAGCTTGCTAATCTTGGACAAGATGATGTTTGG
AAATCAATCCAAAATAGTAGTAACAAAGCAGAGCCAATTACATCAGTTGATGTTTGGAGC
TCTATTTTAACTCAAAAGAAAGATGACTCATCAGCCACAGTTCCACCTCCTTATATTCAC
CCTCTCTTAAAAAAATCCAGCTCTTTGACTGAGAAAAGTCTTAAAATTTGTACTGAAAGT
CTTGGATCAGAGACTGGCTCTGAAATTAACCTTTCCTCTTACCCACCCTCTGAGTCTGAT
GATGACAAAGACGATCATCAACAACAACAAGAATTCATCTCTCACTCATTTGAGGAATTT
CCAGTTGTTAAGTACAATCATAACAAAAGATCATCATCTACTCCTAAGTCATTCCCTCCT
CCTATTTCTTCCTTGGCTGCAGAGGATAAACCCTCTGTTCACATGCAATCTCACAGGCAA
AATGGTAGATTGATTCTTGAAGCTGTTTCAGTTCCTTCCCAGAATCTTTTCCGTACCCAA
CGCGTTGATGGCCGCCTTCTTCTCACCTTAATCAGCACTAATCCTACTTCAGAAACAGAG
GATAATCAAGAAGTTGCAGAGTTTGAGAAAGTGTTCGACGAAATGCAAGAAGTTGAATAT
AATGAACCACCTCAGTTAGACTATGATGGTGATGATGGTGATGAAGAAGAAGATGAATAT
GAAGAGGAGGATGAAGATGAAGAGGAAGAGGAAGAGGAGGTGGAGGAGAAAGAAAATGGG
ACAAAAGGGATGCAAATTGTGTTGGAACAAAAACCAAGATTGTCAAATGGTAGGATGAAT
GTGAACACATCAACATTGATGATGAAACAACTAATGGGACTAGAGAAAAAGAATCATCAT
CTAAAATGGTCAAACAAAGAGAATGAAATAACCCAAGTTCCTCATTCACTTCCACCAATT
TCTCAGCTGATTACATCATCACCAAATCCACCTTCAGCAGCAGCTTCTTTCAATGCCTAT
GAGTATTTCTGGAGGAAGAATCCCACTATTGTTAACAACTACAATGATGACAAGCAGGTT
GTTGTTTCAGCCCCCAATAGTACTACTCCCAATGCCAACGGTACTACTACAAAGATAACA
TCTTATGAGCAGAAAGATTTGGTGCTAATGAGAGGAAACAAAGGAAATATCAATAACTTG
GTGCCTTTGTTGAAAGGATGCAAAGAACCAAGGAGATCTCTTCTCATTTGGGAGCCTCAC
TGCATTGCCACCTCCTAA

Peptide Sequence

PEP ID

XP_016490717.1
PEP Infomation

PREDICTED: protein FAF-like, chloroplastic [Nicotiana tabacum]
Sequence

MSAATMSIKNFNSTLKMEDKGIPLPPPLPPLSKAGKAKQQGIMSILGSDNNKAAAVVSIR
RTLSADMSSKKWLSQNGFFSPMKKIASSEELANLGQDDVWKSIQNSSNKAEPITSVDVWS
SILTQKKDDSSATVPPPYIHPLLKKSSSLTEKSLKICTESLGSETGSEINLSSYPPSESD
DDKDDHQQQQEFISHSFEEFPVVKYNHNKRSSSTPKSFPPPISSLAAEDKPSVHMQSHRQ
NGRLILEAVSVPSQNLFRTQRVDGRLLLTLISTNPTSETEDNQEVAEFEKVFDEMQEVEY
NEPPQLDYDGDDGDEEEDEYEEEDEDEEEEEEEVEEKENGTKGMQIVLEQKPRLSNGRMN
VNTSTLMMKQLMGLEKKNHHLKWSNKENEITQVPHSLPPISQLITSSPNPPSAAASFNAY
EYFWRKNPTIVNNYNDDKQVVVSAPNSTTPNANGTTTKITSYEQKDLVLMRGNKGNINNL
VPLLKGCKEPRRSLLIWEPHCIATS

Transcript Sequence

Gene sequence data has not been registered.